S26 Molecular Methods to Characterize Microbial Pathogens: Outside the Whole Genome Sequence World

Monday, July 27, 2015: 8:30 AM-10:00 AM
B115 - B116 (Oregon Convention Center)
Primary Contact: Keith Lampel
Organizers: Keith Lampel and Christopher Elkins
Convenors: Christopher Elkins and Efstathia Papafragkou
With the so much attention given to whole genome sequencing, other ‘omics’ disciplines, such as transcriptomics and proteomics, seem to be below the radar screen. In regard to food safety, these omics can provide much meaningful descriptive data on foodborne pathogens, such as monitoring the response of these microbes in several different environmental conditions. Some speakers in this session will address the application of these omic approaches beyond the development of detection assays, others will discuss molecular- and phage-based methods as alternate methods.  Knowledge of how foodborne pathogens respond physiologically to their environment, as captured by transciptomics and proteomics can provide critical insight to the underlying genetic capability of these microbes to adjust and sustain themselves in foods.  The impact on food quality (industry concern) and food safety (all IAFP members) can be significant, specifically if applied to improvements in HACCP and FSMA related programs to reduce foodborne illnesses.

Presentations

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