Purpose: This study aimed to 1) analyze the relationship between Salmonella serotypes and PFGE patterns from beef carcasses and feedlot isolates and 2) to molecularly characterize Salmonella isolates from lymph nodes and fecal samples of cattle from slaughter facilities in Mexico
Methods: A set of 93 Salmonella isolates from beef carcasses and feedlot, previously serotyped, were used to perform PFGE. In addition, 33 Salmonella isolates from lymph nodes (mandibular, mediastinal, and mesenteric) and feces from 12 animals were analyzed to assess genetic relatedness. Subtyping was performed according to the PulseNet PFGE protocol for Salmonella serotypes.
Results: The serotypes previously identified were S. Muenster (26.9%), S. Kentucky (19.4%), S. Reading (15.1%), S. Anatum (12.9%), S. Give (5.4%), S. Mbandaka (5.4%), S. Montevideo (3.2%), and S. Tennessee (2.0%). Nine samples (9.7%) were not identified by traditional serotyping, 77.7% of them were associated to a PFGE subtype when analyzed by PFGE. Salmonella Kentucky was the most clonal in this study, 100% of the isolates had indistinguishable PFGE pattern; S. Muenster was the most diverse, 11 different subtypes were identified. Cluster analysis of PFGE patterns showed great relation (90.3%) between serotypes and PFGE subtypes.
Significance: Results suggest there is a high concordance between serotypes and PFGE subtypes among isolates from beef carcasses and feedlot from Mexico. The diversity observed inter and intra-serotypes is important to discriminate among clones to enhance epidemiological studies. More research is needed to improve interventions at different points in the food chain.